Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEFILKIQAKDSKGLVSAISATIANKGYNIVKNDEFVDPLKQRFFMRLKIQKEMKPLNTEIKEQEERSLKTALFKALENFSELLIEVIL-THKKNIILLATKESHCLGDLLLRVYGGELNAQILGVISNHEILRPLVEKFDIPYFYAPCVD--QILHEKEVLATIKDLELKHKVSADLLVLAKYMRILSHDFTKRYENQILNIHHSFLPAFIGANPYQQAFERGVKVIGATAHFVNESLDAGPIILQDTLPINHNYSVEKMRLAGKDIEKLVLARALKLVLEDRVFVHENKTVVF
3LOU Chain:A ((9-291))
-HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATD---------LRVDALRREFEPIAERF-RMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITADTKAQQEAQWLDVFET------SGAELVILARYMQVLSPEASARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDHSYRPEQLLAVGRDVECITLARAVKAFIERRVFLNGDRTVVF
General information:
TITO was launched using:
RESULT:
Template:
3LOU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -229164 for 2171 contacts (-105.6/contact) +
2D Compatibility (PS) -29317 + (NN) -4684 + (LL) 1356
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -288009.0 ( -132.66 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_3LOU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LOU-query.scw
PDB file :
Tito_Scwrl_3LOU.pdb
: