Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKV-SEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPA--SEYLFIVFCAPVGAYFK--GGIEKGGARFITTAFDRAAPKG-TGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHS-PSILPSVTRKSLMVLAKEHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNKSYSFEA--PGNITKQLYDLLLSIQQGEQEAPKDWIFEVG |
1IYE Chain:A ((8-307)) | -----------------------------YIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHK-GPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNN--------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDA-MVSS-WNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVN--GYISEGAGENLFEVKD-GVLFTPPFTSSALPGITRDAIIKLAKELGI-EVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGI----QVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142670 for 2436 contacts (-58.6/contact) +
2D Compatibility (PS) -31377 + (NN) -13290 + (LL) 2556
1D Compatibility (HY) -15200 + (ID) 4650
Total energy: -204631.0 ( -84.00 by residue)
QMean score : 0.462
|
|
|