Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLI-GASVPQEFLFLAMAESKF-SSRAYSRKKAVGIWQFMPSTAKELGLKVNHYI---DERRDPIKSTQAAIAYLKRLYKQTGEWYLVAMAYNYGLRKVQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
3W6B Chain:A ((24-183)) | -----------------------------------------------------------PPTNPPTTVTKPAEVPSRIWTYVMNADNAYGKGGDFALLLSAVIKKESYFGDGLSGSPSAGDGLMQVEPNTRNAYLSQFSAKYGHAYNHSSEQDQVYMGSLILNEKIVRFGSIYSGLLHYNGGDYWYPGAT--------------DSYGRPILADQYANTVYAQYKSYGGRYSR-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52986 for 1175 contacts (-45.1/contact) +
2D Compatibility (PS) -15824 + (NN) -1863 + (LL) 16928
1D Compatibility (HY) 2000 + (ID) 1100
Total energy: -52845.0 ( -44.97 by residue)
QMean score : 0.392
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