Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDSAVP-RFPLSELEAVLADEELYLAFSEWFSEAFLDVLKKYPND----RFAINIAPQQL----FYIETLHWLDKLKSESHRITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVMSYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQGYLVNKPFPV---------------- |
| 3SY8 Chain:D ((3-398)) | DLNVLVLQRLVAVTALKKVVPGSILEAADGKEAVAILEDIAICDLQMSGMDGLAFLRHASLSGKVHSVILSSEVDPILRQATISMIECLGLNFLGDERITALLTRYNAREVAELPSVADVVRGLDNGEFEAYYQPKVALDGGGLIGAEVLARWNHPHLGVLPPSHFLYVMETYNLVDKLFWQLFSQGLATRRKLAQLGQPINLAFNVHPSQLGSRALAENISALLTEFHLPPSSVMFEITETGLI-----------SAPASSLENLVRLWIMGCGLAMDDFGAGYSSLDRLCEFPFSQIKLDRTFVQ-KMKTQPRSCAVISSVVALAQALGISLVVEGVESDEQRVRLIELGCSIAQGYLFARPMPEQHFLDYCSGSLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156362 for 1720 contacts (-90.9/contact) +
2D Compatibility (PS) -23969 + (NN) -16137 + (LL) 424
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -211944.0 ( -123.22 by residue)
QMean score : 0.576
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