Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRA----GFR-EEVVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADKLDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNPSEIPPFFDEYARLVKWIFKK
2PQ7 Chain:A ((14-114))
-LREILNIVREAFKDYDD---PAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRP---------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15017 for 296 contacts (-50.7/contact) +
2D Compatibility (PS) -5940 + (NN) -3767 + (LL) 8940
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -17884.0 ( -60.42 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2PQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PQ7-query.scw
PDB file :
Tito_Scwrl_2PQ7.pdb
: