Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
1BS8 Chain:C ((32-147))
----------------------------------------------DDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDE--RLVLINPELLEKSGETGI---EEGCLSIP-EQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS---------------
General information:
TITO was launched using:
RESULT:
Template:
1BS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61059 for 861 contacts (-70.9/contact) +
2D Compatibility (PS) -12479 + (NN) -3857 + (LL) 3892
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -87753.0 ( -101.92 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_1BS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BS8-query.scw
PDB file :
Tito_Scwrl_1BS8.pdb
: