Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQ-TKKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEI-PNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
3UF7 Chain:A ((3-224))
---NELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVL-
General information:
TITO was launched using:
RESULT:
Template:
3UF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93626 for 1789 contacts (-52.3/contact) +
2D Compatibility (PS) -23757 + (NN) -13521 + (LL) 680
1D Compatibility (HY) -18800 + (ID) 6050
Total energy: -155074.0 ( -86.68 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_3UF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF7-query.scw
PDB file :
Tito_Scwrl_3UF7.pdb
: