Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELHATTIFAVQHDGKAAMAGDGQVTLGESV-VMKHTAKKVRRL-FHDKVIAGFAGSVADAFTLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGR---ALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL
2Z3B Chain:A ((3-179))
--FHATTIFAVQHKGRSAMSGDGQVTFGQ-AVVMKHTARKVRKLFN-GKVLAGFAGSVADAFTLFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKKHAGE---SMSASEIARAALETAGEICVYTNDQIILEEL
General information:
TITO was launched using:
RESULT:
Template:
2Z3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96012 for 1480 contacts (-64.9/contact) +
2D Compatibility (PS) -19117 + (NN) -6382 + (LL) -96
1D Compatibility (HY) -20000 + (ID) 6750
Total energy: -148357.0 ( -100.24 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2Z3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z3B-query.scw
PDB file :
Tito_Scwrl_2Z3B.pdb
: