Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDD------------EATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN
2PV1 Chain:A ((2-103))----------------------------------------------------------------------------------------------------------------------------------------ELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAK-KGDIVGPIRSGVGFHILKVNDLR------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21404 for 662 contacts (-32.3/contact) +
2D Compatibility (PS) -10103 + (NN) -7764 + (LL) 14752
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -29769.0 ( -44.97 by residue)
QMean score : 0.728

(partial model without unconserved sides chains):
PDB file : Tito_2PV1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PV1-query.scw
PDB file : Tito_Scwrl_2PV1.pdb: