Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDD------------EATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
2PV1 Chain:A ((2-103)) | ----------------------------------------------------------------------------------------------------------------------------------------ELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQ-QALNGGQMGWGRIQELPGIFAQALSTAK-KGDIVGPIRSGVGFHILKVNDLR------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21404 for 662 contacts (-32.3/contact) +
2D Compatibility (PS) -10103 + (NN) -7764 + (LL) 14752
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -29769.0 ( -44.97 by residue)
QMean score : 0.728
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