Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3NV7 Chain:A ((3-148))
---KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPK-----------
General information:
TITO was launched using:
RESULT:
Template:
3NV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84077 for 900 contacts (-93.4/contact) +
2D Compatibility (PS) -15998 + (NN) -7668 + (LL) 1200
1D Compatibility (HY) -15200 + (ID) 3150
Total energy: -124893.0 ( -138.77 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3NV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NV7-query.scw
PDB file :
Tito_Scwrl_3NV7.pdb
: