Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAK |
1JTH Chain:A ((11-72)) | ----------------------------------------------------------------------------------------------------------------------------------LEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDMK------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13836 for 240 contacts (57.6/contact) +
2D Compatibility (PS) -7198 + (NN) -4138 + (LL) 15300
1D Compatibility (HY) -400 + (ID) 450
Total energy: 16950.0 ( 70.62 by residue)
QMean score : 0.816
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