Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGQYDITGKACIMGILNVTPDSFSDGGSYTTIDSALNQVGEMLEQGVAIVDIGGESTRPGAVFVTAEEEIKRVVPMIKAIREVYPDLLLSIDTYKTEVAQAALDAGVHILNDVWSGLYDGKMLSLAAERNVPIILMHNQEEAVYQD-------------IKKEVCEFLLERAERALEA------------GVSKDNIWIDPGFGFAKTEEQNLELLKGLEQVCDLGYPVLFGISRKR-TVNYLLGGNREVT--------ERDMGTAALSAWAIAKGCQIVRVHNVEVNKDIVTVISQLV |
| 2VEG Chain:A ((8-299)) | ---------AKTVICGIINVTP---------FALEQALQQARKLIAEGASMLDIGGE-----SSYVEIEEEIQRVVPVIKAIRK-ESDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFAFT--ELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVHDVASHRMAVEIASAIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159097 for 2013 contacts (-79.0/contact) +
2D Compatibility (PS) -26838 + (NN) -14195 + (LL) 472
1D Compatibility (HY) -19200 + (ID) 4950
Total energy: -223808.0 ( -111.18 by residue)
QMean score : 0.514
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