Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLEDNYWY----TAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGYGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSNGDFLNRDNIEHFVNYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIQYDLAKVFQSHHNMMVSHARAVKLYKDK-GYKGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATYLGYYSEMTMAGVKHILKENGGELD---LREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVP--KTDWDWIIYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKD-EFVDNTVYDDGRIDYVKQHLEVLSEAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAHWYKQVAKTQIIE |
| 1GON Chain:A ((17-476)) | ---TFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPG-RTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLT-DSDADADAVRRIDALANRVFTGPMLQGAYPE-------DLVKDTAGLTDWSFVRDGD---LRLAHQKLDFLGVNYYSPTLV------------------SAHSPWPGADR-VAFHQPPGETTAMGWAVDPSGLYELLRRLSSDFPALP-LVITENGAAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTGTRIPKASARWYAEVARTGVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193627 for 3920 contacts (-49.4/contact) +
2D Compatibility (PS) -46319 + (NN) -18183 + (LL) 2140
1D Compatibility (HY) -20800 + (ID) 8050
Total energy: -284839.0 ( -72.66 by residue)
QMean score : 0.773
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