Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNFSMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF
1HD8 Chain:A ((3-356))-------------------------LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG---------------NLKPGMQVPVSQLIRDINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQY--------------SSARDMALIGQALIRDVPNEYSIYKEKEFTF----NGIRQLNRNGLLW------DNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTF--KGREAESKKLLTWGFRFFETVNPLKVGKEF---ASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINFQLDG---------KTIEQRPLVVLQEIPEGN----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1HD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133578 for 2783 contacts (-48.0/contact) +
2D Compatibility (PS) -36328 + (NN) -8563 + (LL) 6516
1D Compatibility (HY) -20000 + (ID) 4950
Total energy: -196903.0 ( -70.75 by residue)
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_1HD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HD8-query.scw
PDB file : Tito_Scwrl_1HD8.pdb: