Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSG-EMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIALVK
2B33 Chain:A ((13-138))
MKRFVETDKAPKAIGPYSQAVVVGNMMFVSGQIPIDPETGELVQGTIEEKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGDHRPARSFVAVAQLPRNVEIEIEAIAVKE
General information:
TITO was launched using:
RESULT:
Template:
2B33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68949 for 951 contacts (-72.5/contact) +
2D Compatibility (PS) -13442 + (NN) -3574 + (LL) 0
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -103665.0 ( -109.01 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2B33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B33-query.scw
PDB file :
Tito_Scwrl_2B33.pdb
: