Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNKLIEREKTVYYKEKPDPSSLGFGQYFTDYMFVMDYEEGIGWHHPRIAPYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCE--RMSMPPLDEELVLEALTQLVELEKDWVPKEKGTSLYIRPFVIATEPSLGVK--ASRSYTFMIVLSPVGSYYGDDQLKPVRIYVEDEYVR-AVNGGVGFAKTAGNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVINGEAVTPALSGSI-LSGVTRASAIELIRSWGIPVREERISIDEVYAASARGELTEVFGTGTAAVVTPVGELNIHGKTVIVGDGQIGDLSKKLYETITDIQLGKVKGPFNWTVEV 2EJ3 Chain:C ((3-294)) ------------------------------------IKAGLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPA-IFRLKEHVKRFYNSAKVLRMEIPFAPEELE-EAIKEVVR-------RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEW----------KGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLD--EEGYVAEGSGENLFFVRDG--VIYALEHSVNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMAD------EVFMTGTAAEVTPVSMIDWRP----IGKGTAGPVALRLREVYLEAVTGR-----------

General information: TITO was launched using: RESULT: Template: 2EJ3.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1507 -141757 -94.07 -513.61 target 2D structure prediction score : 0.67 Monomeric hydrophicity matching model chain C : 0.70 3D Compatibility (PKB) : -94.07 2D Compatibility (Sec. Struct. Predict.) : 0.67 1D Compatibility (Hydrophobicity) : 0.70 QMean score : 0.489

(partial model without unconserved sides chains): PDB file : Tito_2EJ3.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2EJ3-query.scw PDB file : Tito_Scwrl_2EJ3.pdb: