Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLNEKQLITEIVGLARSQGLTVHSENAQLNETGMDFQVVFAKDDTGMPWVLRKPRRSDVVERASAEGITLAFLRANLTADVPDWRIHT-------PELIAYPMLKGTPAAGIDLEQKQYVWNMDHQPPSDDFVRTLADILAELHGTDQISAGQSGIEVIRPEDFRQMTADSMVDVKN---K-L--GVSTTLWERWQKWVDDDAYWPGFSSLIHGDLHPPHILIDQN-GRVTGLLDWTEAKVADPAKDFVLYQTI---FGEKETARLLEYYDQAGGRIWAKMQEHISEMQAAYPVEIAKLALQTQQEEHINMALEALGVTSD
3SG8 Chain:A ((3-296))------TYTFDQVEKAIEQLYPDFTINTIEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLL-------LNNLPKQSQNQAAKDLARFLSELHSINISGFKSN--L---VLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP---TVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEEGLNEIR----


General information:
TITO was launched using:
RESULT:

Template: 3SG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1234 -128453 -104.09 -463.73
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -104.09
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_3SG8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SG8-query.scw
PDB file : Tito_Scwrl_3SG8.pdb: