Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVITDITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDMLIRDALDSGKVKPGGVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSREKQQIMQALGASIIHTPRQDGMQGAIQKAIQLETEIENSYCVL-QFKNRVNPSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLK--EKNPAVKTVIVEP-----VGSILNGGE--PHAHKTEGIGMEFIPDYMDKSHFDEIYTVTDENAFRLVKEAAEKEGLLIGSSSGAALYAALE-EAKKASAGTNIVTVFPDSSDRYISKQIYEGGI
1FCJ Chain:A ((11-302))----------IGHTPLVRLNRIG---NGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSG-------------


General information:
TITO was launched using:
RESULT:

Template: 1FCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1613 -5765 -3.57 -20.51
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -3.57
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_1FCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FCJ-query.scw
PDB file : Tito_Scwrl_1FCJ.pdb: