Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERIYLDHAATSPMDERVLEQMIPHFSGSFGNPSSIHSFGRESRKWVDEARAQIAAEIGAAEQEIIFTSGGTEADNLAIMGTALAR-------KDLGRHIITTKIEHHAVLHTCEKL-EGDGFDITYLDVDQ-NGRVSAKQVKEALRDDTILVTVMYGNNEVGTVQPIEEIGELLKEH----------KAYFHTDAVQAFGLLPIDVKNSHIDLLSVSGHKLNGPKGTGFLYASKDVKLSPLLF---GGEQERKRRAGTENVPGIVGLKEAIKLSSEERDEKNEKYQSFKAIFADTLRDAGVAFEVNGDK----EHSLPHVLNLYFPGV--SVEALLVNLDMAGVAVSSGSACTAGS-VLPSHVLTAMFGEESDRLTSSIRISFGLGNTAEQVKTAAKHVADVVKRLT
3A9Z Chain:A ((18-428))-RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAE-FGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQ--CQTLLASVGASCHSDHEDRPSPVLLSC-GIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQL-


General information:
TITO was launched using:
RESULT:

Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2070 7878 3.81 21.29
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 3.81
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_3A9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A9Z-query.scw
PDB file : Tito_Scwrl_3A9Z.pdb: