Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRIALLPGDGIGPEVLESATDVLKSVAERFNHEFEFEYGLIGGAAID---EHHNPLPEETVAACKNADAILLGAVGGPKWDQNPSELRPEKGLLSIRKQLDLFANLRPVKVFESLSDASPLKKEYIDNVDFVIVRELTGGLYFGQPSKRYVNTEGEQEAVDTLFYKRTEIERVIREGFKMAAARKGK-VTSVDKANVLESSR-LWREVAEDVAQEFPDVKLEHMLVDNAAMQLIYAPNQFDVVVTENMFGDILSDEASMLTGSLGMLPSASLS--SSGLHLFEPVHGSAPDIAGKGMANPFAAILSAAMLLR-TSFGLEEEAKAVED---AVNKVLASGKRTRDLARSEEFSSTQAITEEVKAAIMSENTISNV
3FMX Chain:X ((7-356))---RIAAIPGDGIGLEVLPEGIRVLEAAA--LKHGLALEFDTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWP--DKVPDHISLWGSLLKFRREFDQYVNIRPVRLFPGVPCA--LANRKVGDIDFVVVRENTEGEYSSLGGIMFENTENEIVIQESIFTRRG-VDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMAAHYPHVSWDKQHIDILCARFVLQPERFDVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVHGSAPDIFGKNIANPIAMIWSGALMLEFLGQGDERYQRAHDDMLNAIERVIADGSVTPDMGGTLS-------TQQVGAAI---------


General information:
TITO was launched using:
RESULT:

Template: 3FMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1863 50575 27.15 149.19
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain X : 0.78

3D Compatibility (PKB) : 27.15
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_3FMX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FMX-query.scw
PDB file : Tito_Scwrl_3FMX.pdb: