Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIANYTLKVKG-----KTLLQDTDLHFSSGKINHVVGKNGVGKSQLAKDFLL---NNSKRIG--R-------------DIRQNVSLISSSSN--IPNDVSKDFLLHFLSKKFDA---KMIDKIAYLLNLDNID---GKVLIKNLSDGQKQKLKLLSFLLEDKNIIVLDEITNSLDKKTVIEIHGFLNKYIQENPEKIIINITHDLSDLKAIEGDYYIFNHQEIQQYHSVDKLIEVYINE
4HUQ Chain:A ((3-234))IAFEHVTYTYQAGTPMAHTALTDVSLTVPDRGYLAIIGHTGSGKSTLIQQLNALLKPTSGTIKIDEFTITPETTNAALKPLRQHVGMVFQFPENQLFE-ETVRQDIAFGPKNFGMADADALALADEMLTTVGLDQSYAERSPFELSGGQMRRVAIAGVLAMQPKVLVLDEPTAGLDPQGRQEMMRLFARLHQEQG-LTIVLVTHQMEDVAQYAEQVAVMHEGRLMKFGTPADVF------


General information:
TITO was launched using:
RESULT:

Template: 4HUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 955 17791 18.63 88.51
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 18.63
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4HUQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HUQ-query.scw
PDB file : Tito_Scwrl_4HUQ.pdb: