Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGTPQPRALGPDAL--DVSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMASVLSDAVRRSVGQGAA-------MLKGEKRSGLRVHARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
1EE8 Chain:A ((115-266))
---IPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREVLAEAVELGGSTLSDQSYRQPDGLPGGFQTRHAVYGREGLPCPACGRPVERRVVAGRGTHFCPTCQGEGP------------
General information:
TITO was launched using:
RESULT:
Template:
1EE8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65068 for 1082 contacts (-60.1/contact) +
2D Compatibility (PS) -15306 + (NN) -7910 + (LL) 1464
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -96420.0 ( -89.11 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1EE8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EE8-query.scw
PDB file :
Tito_Scwrl_1EE8.pdb
: