Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQT-KALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLT-------LGGSDIDADFVVF-DGILYATLT-------PNQWSDFGPAADIYDPAQ----------------------------VLNPDTGLANVLANFADAKAEGRDTINGQNTIRISG-KVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQL-DRGSGNSVQMT-----LSKWGEKVQVT--KPPVS |
3HL1 Chain:A ((3-317)) | PPVWTLPRLYQHFQGAIDLELWTIPYYLTVLYSIKDPTTVPYRLIQAAVYQEMLHAQLVSNIANAYGYSPTLSAPEYVGTAVPHIDFDLDTPNPTSIFTPYSAELGPLDLTRVNTMCLIEYPEWRTQREPDLADDVTDYGSIGEFYDALRVGMEQLRGHVRGNQKQMDENSPPLTVTESGDAGFLQALTLVDIIVDQGEGQAWPHFQRFDFIRRMPNWPGVYTGVTDPPAGSPGAEAQARLIADFAGFLDILNGMFSGGGAPPAFGVQMAKLGGDILSCWKLGAVPRYS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8123 for 1745 contacts (4.7/contact) +
2D Compatibility (PS) -24804 + (NN) -7636 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 1650
Total energy: -23967.0 ( -13.73 by residue)
QMean score : 0.121
|
|
|