Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCG-------ATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFR-GGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLG----FTSGGVRLTRTKTRPYLGDLGAAVA-----PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG-- |
| 3ECA Chain:A ((1-326)) | -----------LPNITILATGGTIAGGGDSATKS-NYTVGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDK--TDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAK-TGTAVVRSSRVPT-GA---TTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ECA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241783 for 2763 contacts (-87.5/contact) +
2D Compatibility (PS) -34501 + (NN) -22902 + (LL) 288
1D Compatibility (HY) -15600 + (ID) 4550
Total energy: -319048.0 ( -115.47 by residue)
QMean score : 0.512
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