Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MGGLTISDLVVEYSSGGYAVRPIDGLSLDVAPGSLVILLGPSGCGKTTLLSCLGGILRPKSGSIKFDDVDITTLEGAALAKYRRDKVGIVFQAFNLVSSLTALENVMVPLRAAGVSRAAARKRAEDLLIRVNLGERMKHRPGDMSGGQQQRVAVARAIALDPQLILADEPTAHLDFIQVEEVLRLIRSLAQG-DRVVVVATH-DSRMLPLADRVLELM---------PAQVSPNQPPETVHVKAGEVLFEQSTMGDLIYVVSEGEFEIVRELADG---------GEELVKTAAPGDYFGEIGVLFHLPRSATVRAR--SDATAVGYTAQAFRERLGVTRVADLI-EHRELASE |
| 1Z47 Chain:A ((11-355)) | GSMTIEFVGVEKIYPGGARSVR---GVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQK-----RN-VGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166568 for 2416 contacts (-68.9/contact) +
2D Compatibility (PS) -35361 + (NN) -17476 + (LL) 628
1D Compatibility (HY) -13600 + (ID) 4400
Total energy: -236777.0 ( -98.00 by residue)
QMean score : 0.402
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