Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEEQRTMSVEGADQQSEKLFHYLKKVAVELDETRARLREYEQRATEPVAVVGIGCRFPGGVDGPDGLWDVVSAGRDVVSEFPTDRGWDVEGLYDPDPDAEGKTYTRWGAFLDDATGFDAGFFGIAPSEVLAMDPQQRLMLEVSWEALEHAGIDPLSLRGSA---TGVYTGIFAASYGN--RDTGGLQGYGLTGTSISVASGRVSYVLGLQGPAVSVDTACSSSLVAIHWAMSSLRSGECDLALAGGVTVMGLPSIFVGFSRQRGLAA-DGRCKAFAAAADGTGWGEGAGVVVLERLSDARRLGHSVLAVVRGSAVNQDGASNGLTAPNGLAQQRVIQVALANAGLSAADVDVVEAHGTATTLGDPIEAQALLSTYGQGGPAEQPLWVGSIKSNMGHTQAAAGVAGVIKMVQAMRHGVMPATLHVDEPSPRVDWTSGAVSVLTEAREWS-----VDGR----PRRAAVSSFGISGTNAHLILEEAPVPAPAEAPVEASESTGGRGRRWCRG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4KC5 Chain:A ((8-921)) | ------------------------------------------NELANYIAVIGLGGYYPG-ADSIDELWQNLANGVDCMSDFPADR-WDHSKIYYKNRKVLGKTTCINGSFIKDVDKFDYSYFKMPKVYADHMSPEVRLFLQVAVHTFEDAGYSKETLLSRYNGDVGVLLGTMSNDYHYYGFESNVFRGSMASGSGMATIPMTVSYFYGLTGPSLFIDTMCSSSSTCIHTACQMLKHDETKMVLAGGLNLMYHPYTTVNTSQGNFTSITSESVNSYGVGADGTVIGEGIGAVLLKRLDRAIADRDQIYGVIKGSAMTNAGERNGFNVPNPDLQTLAIRQAMDQAKVHPSSISYIEGHGSGTKLGDPIEVLGLNNAFRWATDDKQFCYLGSIKSNIGHLLAASGIAGLTKTLLQFKHKQIAPSIHSSQLNQDIDFADTPFVVPQQLIEWRQPERIINGRKQVFPRRAGLTSIAAGGMNAHMIVEEYPEPADSAGQISEDQ------------LVFVFSVHKLALLAQNLTSFRDWLASSEAPLAQIAYTLQVGKNNLRNRLAIRCRTRQALSRALNACIDGHYQSSADSKIFYRFQESDAVQPLESDLNDPLAPLLTQWLNGDSQVDWASLYAQPPVRISLPAYRFEKTRCWYTEEGYESSIVNPLMFKNKLHPLVAKNCSTPQPGAIFRTDFVEDELLDYVYSGRGGRRLSAFNFADVALAMPALASRFDGRTLSVSCAFEHYIADWTTVTGLEYRLFEIDSEQLELEFDFRRSGEQPTHLGFAVINPLTSDEPPLPQQWLDDARELLNRQALQAGRQLSAAEVSQRLAQAGYDFAPYLDHDGELTIGRSGLVLKGRPPVNRHNHYADNVQLSPYLATTIDKALYLLLDELGLPQGRVIVRNIERLCCYHTPAGGFSVVLSGIGLNDNELSLSLLVLDEREQICVKLDKVSLYLGKQEVASVDRKHSLLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244921 for 4066 contacts (-60.2/contact) +
2D Compatibility (PS) -45603 + (NN) -16013 + (LL) 3804
1D Compatibility (HY) -25200 + (ID) 7300
Total energy: -335233.0 ( -82.45 by residue)
QMean score : 0.492
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