Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVVLSVGSNLGDRLARLRSVADGLGD---ALIAASPIYEADPWGGVEQGQFLNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQTSATEALVEVTARENHLTLPHPLAHLRAFVLIPWIAVDPTAQLTVAGCPRPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES
2CG8 Chain:A ((119-268))
KQRAFIALGSNMGDKQANLKQAIDKLRARGIHILKESSVLA----------SFANQVVEVE-TWLPAQDLLETLLAIESELGR----------IDLDLLFV---------EDQILYTDDLILPHPYIAERLFVLESLQEIAPHFIHP--ILKQPIRNLYDAL-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119670 for 1071 contacts (-111.7/contact) +
2D Compatibility (PS) -13428 + (NN) -3531 + (LL) 2336
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -144343.0 ( -134.77 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2CG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CG8-query.scw
PDB file :
Tito_Scwrl_2CG8.pdb
: