Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPV---EVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEP-------RVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
1VEZ Chain:A ((1-172))
-SVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDTSGFWEGCLSVPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLFGFNETLDSS-----
General information:
TITO was launched using:
RESULT:
Template:
1VEZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64478 for 1260 contacts (-51.2/contact) +
2D Compatibility (PS) -16988 + (NN) -2149 + (LL) 736
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -101929.0 ( -80.90 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1VEZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VEZ-query.scw
PDB file :
Tito_Scwrl_1VEZ.pdb
: