Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
4I0B Chain:A ((24-219))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTLPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVY---
General information:
TITO was launched using:
RESULT:
Template:
4I0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146297 for 1384 contacts (-105.7/contact) +
2D Compatibility (PS) -21349 + (NN) -6165 + (LL) 1224
1D Compatibility (HY) -24400 + (ID) 6550
Total energy: -203537.0 ( -147.06 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_4I0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I0B-query.scw
PDB file :
Tito_Scwrl_4I0B.pdb
: