Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDLN-IPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
3UF7 Chain:A ((3-224))
---------NELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLP
General information:
TITO was launched using:
RESULT:
Template:
3UF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94884 for 1799 contacts (-52.7/contact) +
2D Compatibility (PS) -23998 + (NN) -15518 + (LL) 320
1D Compatibility (HY) -19200 + (ID) 6100
Total energy: -159380.0 ( -88.59 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3UF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF7-query.scw
PDB file :
Tito_Scwrl_3UF7.pdb
: