Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAESPTIRLERYSERHVEGLTALYND-PAVARQVLQMPYQSVEQRRKRLHDSADD---DRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE
1S7K Chain:A ((5-178))
-IPVSTTLELRAADESHVPALHQLVLKN-----------------TRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIE--PINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIIDAD-----
General information:
TITO was launched using:
RESULT:
Template:
1S7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64837 for 1085 contacts (-59.8/contact) +
2D Compatibility (PS) -15939 + (NN) -4404 + (LL) 2280
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -91100.0 ( -83.96 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1S7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7K-query.scw
PDB file :
Tito_Scwrl_1S7K.pdb
: