Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNMP------SILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYPAFRAKNNK--VNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERGAKVYAAQCAICHGADGQGQMALGQTVFPPLWGAQSFNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
2JFV Chain:A ((19-288)) | MIRLTDNRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDT--ARCPYGP--RPAEQVIQYTWEMTDYLVEQGIKMLVI----------ACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVAKKIVAETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNL-----------SNSPQNGRTLCQFYTTGSAKLFEEIAEDWLGIGHLNVEHIEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28431 for 2261 contacts (-12.6/contact) +
2D Compatibility (PS) -27280 + (NN) -3809 + (LL) 1612
1D Compatibility (HY) -1600 + (ID) 2050
Total energy: -61558.0 ( -27.23 by residue)
QMean score : 0.112
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