Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCG------LCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAIAGKPKGAAQNEAEPINVKSLLP
2ZVS Chain:A ((4-63))
---------------------------------------------------------ITKKCINCDMCEPECPNEAISMGDHI----------YEINSDKCTECVGHYETPTCQKVCPIPNTIVKDP-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44570 for 326 contacts (-136.7/contact) +
2D Compatibility (PS) -5333 + (NN) -708 + (LL) 7600
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -46511.0 ( -142.67 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_2ZVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZVS-query.scw
PDB file :
Tito_Scwrl_2ZVS.pdb
: