Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRAAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISSRTGVRQRHIA-GDLGSGDLALRAASAALASAG--LERVDAVVLATSTGDFCCPATAPRVAARLGLVGALAFDLSAACTGFVYGLASVGSLISAGLADSALLVGVDTFSHTLDPADRSTRALFGDGAGAVVLRAGDAEEEGALLAFDLGSDGHQFDLLMTPAVSRAERSS-GQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLPVERVVS-NIAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRWPKIVPTMD |
| 1U6E Chain:A ((10-334)) | -ARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGETPF---QGIGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRMPK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270280 for 3000 contacts (-90.1/contact) +
2D Compatibility (PS) -33452 + (NN) -7300 + (LL) 960
1D Compatibility (HY) -14400 + (ID) 6000
Total energy: -330472.0 ( -110.16 by residue)
QMean score : 0.526
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