Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MIEADYLVIGAGIAGASTGYWLSAH---GRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEHPLLSPRPEMVVDFSDDP-EELRRQYESGKALVPQMRLLDAEQACSIVPVLRRD-----KVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIR-RVDGAWEVRCDAGSYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDCHDWPMLVSLDESFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEATTLTIRRPEHTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLREHGLDEAMLSPRRLSP----- |
| 1X31 Chain:B ((1-402)) | ADLLPEHPEFLWNNPEPKKSYDVVIVGGGGHGLATAYYLAKNHGITNVAVLEKG-WLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEELPEELEYDFLFSQRGVLNLAHTLGDVRESIRRVEANKFNGVDAEWLTPEQVKEVCPIINTGDNIRYPVMGATYQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFLKDGEKVTGVKTTRGTILAGKVALAGAGHSSVLAELAGF-ELPIQSHPLQALVSELFEPV--HPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIEEQMAA-AVELFPIFARAHVLRTWGGIVDTTMDASPIISKT-PIQNLYVNCGWGTGGFKGTPGAGYTLAHTIAHDEPHKLNAPFALERFETGHLIDEHGAAAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188293 for 3369 contacts (-55.9/contact) +
2D Compatibility (PS) -39026 + (NN) -10190 + (LL) 460
1D Compatibility (HY) -5600 + (ID) 3050
Total energy: -245699.0 ( -72.93 by residue)
QMean score : 0.421
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