Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISA--GGKRLRPLLVLLAGKTLGYKG-----DDLCLLAATIEFLHTSTLLHDDVVDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRIISQATRVIAEGEVLQLSKVRDASTTEETYMEVIRGKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGG--SQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNE------YRSALVELSEFAVARTH |
| 3APZ Chain:A ((8-348)) | ---LDPFSLVADELSLLSNKLREMVLAEVP------------GVQGKQFRSTILLLMATALDV--TSELRVRQRGIAEITEMIHVASLLHDD----------------VMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQ-----LREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITRNK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3APZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175046 for 2270 contacts (-77.1/contact) +
2D Compatibility (PS) -30964 + (NN) -16371 + (LL) 2664
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -240067.0 ( -105.76 by residue)
QMean score : 0.525
|
|
|