Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESD-DSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKP-LDRGMKNVAFISDPDGYWVEIVQASLNGEMGRG
3W0T Chain:A ((14-184))
--LTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKMA-----
General information:
TITO was launched using:
RESULT:
Template:
3W0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73462 for 1092 contacts (-67.3/contact) +
2D Compatibility (PS) -18520 + (NN) -9756 + (LL) 248
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -123890.0 ( -113.45 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3W0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W0T-query.scw
PDB file :
Tito_Scwrl_3W0T.pdb
: