Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENEFTYEDYETTAKWLLQHTEY-RPQVAVICGSGLGGLTAHLKEA-QIFDYNEIPNFPQSTVQGHAGRLVFGLLNGRCCVMMQGRFHMYEGYSLSKVTFPVRVFHLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFCGQNPLRGPNDERFGVRFPAMSDAYDRDMRQKAFTAWKQMGEQRKLQEGTYVMLAGPNFETVAESRLLKMLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVVMDYENLEKANHMEVLDAGKAAAQTLERFVSILMESIPLPDRGS |
| 1G2O Chain:A ((8-268)) | -----PDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLN---LTARSPLV-------GGEFVDLTDAYSPRLRELARQSDP------QLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGI--TGEPLSHAEVLAAGAASATRMGALLADVIARF------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -222755 for 2331 contacts (-95.6/contact) +
2D Compatibility (PS) -27471 + (NN) -11790 + (LL) 596
1D Compatibility (HY) -11600 + (ID) 4950
Total energy: -277970.0 ( -119.25 by residue)
QMean score : 0.421
|
|
|