Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKGLLVMDVDSTLIMEEAIDLLAIEAGVGKQVAALTDAAMRGELDFEEALKKRVALLKGLPVTILTDILSSIHFTPGAYELIKECHKRQMKVGLVSGGFHETIDILAKQLQVDYVKANRLGVKGGFLTGEVEGEIVTKEVKKIKLKEWASENHLDLSQTIAMGDGANDLPMIKSAGVGIAFCAKPIVREEAAYQINEKNLLKVFDIIDANEN
3P96 Chain:A ((184-393))
-AKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRG
General information:
TITO was launched using:
RESULT:
Template:
3P96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135308 for 1850 contacts (-73.1/contact) +
2D Compatibility (PS) -22795 + (NN) -10127 + (LL) 208
1D Compatibility (HY) -18000 + (ID) 4650
Total energy: -190672.0 ( -103.07 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_3P96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P96-query.scw
PDB file :
Tito_Scwrl_3P96.pdb
: