Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMVLERERFMTESDIKVIKRDGRLVSFDKYKIYTALLKASNKVIKMSPLVEAKLEMIADHVIAEIYNRFKDNIKIYEIQNIVEHKLLEANEYAIAQEYINYRTQRDFERSQATDINFSIGKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTADRIDEFLAPYAQLNYQKHLKDAKEWVIEDKQEDYARAKTQKDIYDAM-----QSLEYEINTLFTSNGQTPFTSLGFGLGTNWFEREIQKAILKIRIQGLGSEHRTAIFPKLIFTLKKGLNLEEDSPNYDIKQLALECATKRMYPDVLSYDKIIDLTGSFK-APMGCRSFLQGWRDANGQDVTSGRMNLGVVTVNLPRVAMESNGDMDKFWEIFNERM--SIARDALVYRVERVKEAIPANAPILYQYGAFGERLGKYDNVDRLFNHRRATVSLGYIGLYEVASVFYGGDWEDNHQAKAFTVDIVRKMKQLCADWSDEYDYHFSVYSTPSESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKNPTPFEKLDFEKIYPETGASGGFIHYCEYPVLQQNPKALEAVWDYAYDRVGYLGTNTPIDKCYQCQFEGDFTPTDRGFTCPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVKHMNGSSIKNQGN- |
| 4LLG Chain:F ((6-612)) | -----------QSQLKLLVTRGKEQGYLTYAEVNDHLPED---IVDSDQIEDIIQMINDMGI-QVMGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVA---EYPEAITYLLEQYDRVEAEEAR------------------------------------------------------------LSDLITGF------VDDPELAREKFAELRAQYVVTRDTI----KATAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSD----------TWFNAAIAM-------NKPWSEKLHDVSEEVHRALQKLQQIEEETG--------------------LTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEM------------------GREPTPEELAERMLM---------------------------PEDKIRKVLKIAKEPISMETPIGDDE---DSHLGDFIEDTTLE--------------------------LPLDSATTESLRAATHDVLAGL--TAREAKVLRMRFGIDM-------------NTDYTLEEVGKQ------FDVTRERIRQIEAKALRKLRHPSRSEVLRSFLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3766 for 3257 contacts (-1.2/contact) +
2D Compatibility (PS) -53263 + (NN) -2738 + (LL) 12400
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -66467.0 ( -20.41 by residue)
QMean score : 0.205
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