Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLETPKKFRSLANQAHQVAENYFRPISRKYDKAEHAYPKELDLLAALLDGMNSGSPEAVGATSASKRAGKQVEEGIKNGGNLSALLGVMELCWGDVGLLLAMPRQGLGNAAIAAVANEEQLQRF------GGTWAAMAITEPGCGSDSAAIRTTATQD--GDHYVLNGEKIFVTSGERADAVVVWA-TLNRNLGRAAIK----SFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVMETFDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLTVSHAEATLYRLEAEWEAARLLTLKAAWMADNKLPNSK-----EASIAKAKAGRVANEITLKCVELAGALGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARRLLGKSSSQLK |
| 2UXW Chain:A ((126-445)) | ------------------------------------------------------------------------------------------------VGITLG-AHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLG----EVGSGFKVAMHILNNGR-------FGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71259 for 2272 contacts (-31.4/contact) +
2D Compatibility (PS) -30486 + (NN) -15295 + (LL) 7436
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -131404.0 ( -57.84 by residue)
QMean score : 0.344
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