Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVVLPLLVLVLLLVRVQPSLGKESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV
3EV1 Chain:A ((1-124))
--------------------------KETAAAKFERQHMDSSTS--SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3EV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38862 for 868 contacts (-44.8/contact) +
2D Compatibility (PS) -13708 + (NN) -11041 + (LL) 2872
1D Compatibility (HY) -11600 + (ID) 5050
Total energy: -77389.0 ( -89.16 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_3EV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EV1-query.scw
PDB file :
Tito_Scwrl_3EV1.pdb
: