Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIG---RPLPGRKNIILSSQPGT-DDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE---GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
4KLX Chain:A ((21-179))
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTS----PETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDE-TWRGET-GEW-RFSRSGLRYRLYSYHRS
General information:
TITO was launched using:
RESULT:
Template:
4KLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104399 for 1094 contacts (-95.4/contact) +
2D Compatibility (PS) -16465 + (NN) -6373 + (LL) -180
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -139817.0 ( -127.80 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_4KLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KLX-query.scw
PDB file :
Tito_Scwrl_4KLX.pdb
: