Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLPLLVVFSTLLNCSYTQNCTKTPCLPNAKCEIRNGIEACYCNMGFSGNGVTICEDDNECGNLTQSCGENANCTNTEGSYYCMCVPGFRSSSNQDRFITNDGTVCIENVNANCHLDNVCIAANINKTLTKIRSIKEPVALLQEVYRNSVTDLSPTDIITYIEILAESSSLLGYKNNTISAKDTLSNSTLTEFVKTVNNFVQRDTFVVWDKLSVNHRRTHLTKLMHTVEQATLRISQSFQKTTEFDTNSTDIALKVFFFDSYNMKHIHPHMNMDGDYINIFPKRK-AAYDSNGNVAVAFVYYKSIGPLLSSSDNFLLKPQNYDNSEEEERVISSVISVSMSSNPPTLYELEKITFTLSHRKVTDRYRSLCAFWNYSPDTMNGSWSSEGCELTYSNETHTSCRCNHLTHFAILMSSGPSIGIKDYNILTRITQLGIIISLICLAICIFTFWFFSEIQSTRTTIHKNLCCSLFLAELVFLVGINTNTNKLFCSIIAGLLHYFFLAAFAWMCIEGIHLYLIVVGVIYNKGFLHKNFYIFGYLSPAVVVGFSAALGYRYYGTTKVCWLSTENNFIWSFIGPACLIILVNLLAFGVIIYKVFRHTAGLKPEVSCFENIRSCARGALALLFLLGTTWIFGVLHVVHASVVTAYLFTVSNAFQGMFIFLFLCVLSRKIQEEYYRLFKNVPCCFGCLR |
3L4G Chain:C ((1-508)) | MADGQVAELLLRRLEAS--DGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKHWELT----AEGEEIAREGSHEARVFRSIPPEGLAQSELMRL--------------------PSGKVGFSKAMS-NKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSA---FSTSISKQETELSPEMISSG------SWRDRPFKPYNFLAHG--------VLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNF-----------DALFQPQQH-----PARDQHDTFFLRDPAEALQL-----------PMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTP-----------------------------VKYFSIDRVFRNETLDATHL------AEFHQIEGVVADHGLTLGHLMGVLREFFT-------------------KLGITQLRFKPAYNPYTEPSMEVFSYHQGLKKWVEVGNSGV--------FRPEMLLPMGLPENVSVIAWGLSLERPTMIKYGIN-------NIRELVGHKVNLQMVYDSP-----------------------------------LCRLDAEPRPPPTQEAA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231190 for 3719 contacts (-62.2/contact) +
2D Compatibility (PS) -51804 + (NN) 3169 + (LL) 16296
1D Compatibility (HY) 1200 + (ID) 3100
Total energy: -265429.0 ( -71.37 by residue)
QMean score : 0.126
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