Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKISVLGSTGSIGKKTVDLLLKRKEEYQVEALSTC-SNFALLACQAKLLNARYVAISNKRFYKDLKESLLGTGIKVEVGTEGLMNVASLPVDLSVVAVVGIAGLEPVMHVIESGTKVIALANKESIVCGGKLLLKKTEEKNVQIVPIDSEHNAIFQVLQNGNKC-VEKIILTASGGSFLNYSLEQLRNVTVGQALSHPTWNMGKKISVDSATMMNKALEIIEAHNLFNISPNRIEAIVHPESIIHGIVIYKDGFNFAVLAEADMAIPISYALSWPER-SALSYKLDL-TKQKLTFQEPDHKRFPALKLSMEVLNSSSPHTNSIVLNAANEVAVDKFLKSRIDFLEIIKVVKLTVENFDSYT-DINSLSDIINIDLESRAIAKEIIKNKVLAYS
2Y1D Chain:A ((23-397))--RVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAV----------D------IPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGAR-LALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAG----------NTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMT--AVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHAADQWAVEPATVDDVLDAQRWARERAQRAVSGM-----


General information:
TITO was launched using:
RESULT:

Template: 2Y1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -247122 for 3094 contacts (-79.9/contact) +
2D Compatibility (PS) -37308 + (NN) -12816 + (LL) 1844
1D Compatibility (HY) -19200 + (ID) 6250
Total energy: -320852.0 ( -103.70 by residue)
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_2Y1D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y1D-query.scw
PDB file : Tito_Scwrl_2Y1D.pdb: