Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRLEGRKFLVTGASGGIGQAIVKTMHKAGAILCVSGTKKETLEGVAKLYEKNIYI---LPCNLLNTEEVNQLINRASKLMGGLDGLVCNAGVTQDSLLLRMTDEAWQKVVDINLSSTFKLNREAYKKLTKNNWGRIINISSIIGLTGNAGQANYAASKAGIIAMSKSIAKEVASRNITVNCIAPGFMDTKMTKILTEEQKKKILDNIPMKRMGTGEEIAAGVLFLASDEAKYITGHVLNINGGLFM
4BNZ Chain:D ((25-268))
---LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGIT-----VRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147903 for 2007 contacts (-73.7/contact) +
2D Compatibility (PS) -25388 + (NN) -7736 + (LL) 808
1D Compatibility (HY) -18400 + (ID) 5250
Total energy: -203869.0 ( -101.58 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_4BNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BNZ-query.scw
PDB file :
Tito_Scwrl_4BNZ.pdb
: