Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISLLQGKKGLITGIINKRSIAYGIVKTLSEHGAESAVTYQNEIVKERLLSIAAEL--NVELVLNCDVANEGTIDDVFKSIEEKWGTLDFLVHAIAFSDKNELSGKYVNTSLNNFQNAMNISCYSFTALAQRAEKMMPNGGSLLTLSYYGAEKVMPNYNVMGLCKAALEASVKYLACDLGPQNIRVNAISAGPIRTLASSGISDFHFISEWNRNNSPLRRNTTLEDVGKAALYLLSDLSSGTTGEILHVDSGYNVVGMKAIDSNIINSYQN
3OIF Chain:D ((5-255))
-----LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG-SDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITAR-------------
General information:
TITO was launched using:
RESULT:
Template:
3OIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156758 for 2140 contacts (-73.3/contact) +
2D Compatibility (PS) -26591 + (NN) -7162 + (LL) 1664
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -216847.0 ( -101.33 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3OIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OIF-query.scw
PDB file :
Tito_Scwrl_3OIF.pdb
: