Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNV-DVLCT--KGGISSTGDSGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY |
3IL3 Chain:A ((1-316)) | -MNSRILSTGSYLPSHIRTNADLEKMVDTSDEWIVTRSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAISFDLAAA-TGFVYALSVADQFIRAG-KVKKALVIGSDLNSRKLDETDRSTVVLFGDGAGAVILEASEQ---------EGIISTHLHASADKNNALVLAQPERGIEK--SGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260219 for 2927 contacts (-88.9/contact) +
2D Compatibility (PS) -32543 + (NN) -8237 + (LL) 328
1D Compatibility (HY) -24000 + (ID) 7800
Total energy: -332471.0 ( -113.59 by residue)
QMean score : 0.479
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