Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDGK--KENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTRAREVGREKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVCESSLNTITFSTEENEQIDIATTRPELFLACVAVFCHPEDARYAH--LIGKTSVVPIIGV------KVPIIADGRVKIDKGTGLVMCCTFGDELDIYWQQKHNLPMKIIIDQ---DGKINLDSMYDNNRSQYQGIGMTGERSTGVIKEGA---ISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTLDQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPVWYSRRKGEEGKVILAEVEDLPV----------------DPLKDLPKGYSK------EEVVPDQDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLR--SQSHEIIRTWAFYTILKAYYHANSL----PWKNIMVSGWCLADDKK-----------------------------------------------------KMSKSKGNIITPKSILDTYGADVVRYWTA-NSRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 2BYT Chain:A ((1-876)) | --MEKYNPHAIEAKWQRFWEEKGFMKAKDLPGGRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVH-------------PKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTT-RPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIER----PGEPLPEPLERAYEEPGIMVNSGPFDG--TESEEGKRKVIAWLEEKGLGKGRVTYRLR--------DWLISRQRYWGTPIPMVHCEACG----VVPVPEEELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAAL-----MEFLNALYEYRKDR------------PVTPVYRTAIRYYLQMLFPFAPHLAEELWHWF-WPDSLFEAG-WPELDEKALEK------DVVEVAVQVNGRVR-----------GTIHIPKDAPLEVARAEALKV------RNVRAHLEGKEVVKEIYVPGKILNLVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207469 for 6427 contacts (-32.3/contact) +
2D Compatibility (PS) -81179 + (NN) -11500 + (LL) 5476
1D Compatibility (HY) -18000 + (ID) 8250
Total energy: -320922.0 ( -49.93 by residue)
QMean score : 0.276
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