Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASSAAVYGDLPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHN-KPFTFFGDGLQTRDFVYVYDVVQSVRLIM---EHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEF-KEARKGDIKHSYADISNL-KALGFVPKYTVETGLKDYFNFEVDNIEEVTAKEVEMS |
| 3ICP Chain:A ((2-300)) | --RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHV--RDLKDYSWGAGI----KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQ--TGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR-----HGVIYDFIMKLRRNPNVLE------QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLV-----GDVKYMTLAVTKLMKLTGWRPTMTSAEAVK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184956 for 2410 contacts (-76.7/contact) +
2D Compatibility (PS) -28100 + (NN) 302 + (LL) 3364
1D Compatibility (HY) -18400 + (ID) 4800
Total energy: -232590.0 ( -96.51 by residue)
QMean score : 0.457
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